Difference between revisions of "GerE"
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of [[SigK]]-dependent gene expression | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of [[SigK]]-dependent gene expression | ||
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− | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU28410 gerE] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay], [http://subtiwiki.uni-goettingen.de/wiki/index.php/Protein_secretion Protein secretion]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay], [http://subtiwiki.uni-goettingen.de/wiki/index.php/Protein_secretion Protein secretion]''' | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ysmB]]'', ''[[ysmA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ysmB]]'', ''[[ysmA]]'' | ||
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− | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28410 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28410 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28410 Advanced_DNA] |
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Revision as of 13:31, 13 May 2013
- Description: transcriptional regulator (repressor or activator) of a subset of sigma-K-dependent late spore coat genes
Gene name | gerE |
Synonyms | |
Essential | no |
Product | transcriptional regulator (LuxR-FixJ family) |
Function | regulation of SigK-dependent gene expression |
Gene expression levels in SubtiExpress: gerE | |
Function and regulation of this protein in SubtiPathways: Phosphorelay, Protein secretion | |
MW, pI | 8 kDa, 9.635 |
Gene length, protein length | 222 bp, 74 aa |
Immediate neighbours | ysmB, ysmA |
Sequences | Protein DNA Advanced_DNA |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
transcription factors and their control, germination
This gene is a member of the following regulons
The GerE regulon
The gene
Basic information
- Locus tag: BSU28410
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LuxR-FixJ family of transcription regulators
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 1FSE
- UniProt: P11470
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: gerE PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
- Arthur Aronson, Purdue University, West Lafayette, USA homepage
- Charles Moran, Emory University, NC, USA homepage
Your additional remarks
References