Difference between revisions of "YrhJ"
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || fatty acid metabolism | |style="background:#ABCDEF;" align="center"|'''Function''' || fatty acid metabolism | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU27160 yrhJ] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 118 kDa, 6.017 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 118 kDa, 6.017 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rrcM]]'', ''[[fatR]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rrcM]]'', ''[[fatR]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27160 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27160 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27160 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yrhJ_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yrhJ_context.gif]] | ||
Revision as of 13:26, 13 May 2013
- Description: cytochrome P450 (CYP102A3)/ NADPH-cytochrome P450 reductase
| Gene name | yrhJ |
| Synonyms | cypE |
| Essential | no |
| Product | NADPH-cytochrome P450 reductase |
| Function | fatty acid metabolism |
| Gene expression levels in SubtiExpress: yrhJ | |
| MW, pI | 118 kDa, 6.017 |
| Gene length, protein length | 3162 bp, 1054 aa |
| Immediate neighbours | rrcM, fatR |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
electron transport/ other, lipid metabolism/ other, cell envelope stress proteins (controlled by SigM, V, W, X, Y), membrane proteins
This gene is a member of the following regulons
FatR regulon, SigM regulon, SigW regulon, SigX regulon
The gene
Basic information
- Locus tag: BSU27160
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- hydroxylates medium-chain fatty acids in subterminal positions PubMed
- Protein family:
- Paralogous protein(s): YetO
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- Structure: 2X7Y (from Bacillus megaterium; 67% identity, 88% similarity)
- UniProt: O08336
- KEGG entry: [3]
- E.C. number: 1.6.2.4
Additional information
Expression and regulation
- Regulation:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
