Difference between revisions of "CotD"
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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance of the spore | |style="background:#ABCDEF;" align="center"|'''Function''' || resistance of the spore | ||
|- | |- | ||
− | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU22200 cotD] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8 kDa, 7.373 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8 kDa, 7.373 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ypsA]]'', ''[[yprB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ypsA]]'', ''[[yprB]]'' | ||
|- | |- | ||
− | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU22200 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU22200 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU22200 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:cotD_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:cotD_context.gif]] |
Revision as of 13:07, 13 May 2013
- Description: spore coat protein (inner)
Gene name | cotD |
Synonyms | |
Essential | no |
Product | spore coat protein (inner) |
Function | resistance of the spore |
Gene expression levels in SubtiExpress: cotD | |
MW, pI | 8 kDa, 7.373 |
Gene length, protein length | 225 bp, 75 aa |
Immediate neighbours | ypsA, yprB |
Sequences | Protein DNA Advanced_DNA |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
GerE regulon, SigK regulon, SpoIIID regulon
The gene
Basic information
- Locus tag: BSU22200
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: nhaC Na(+)/H(+) antiporter family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- inner spore coat PubMed
Database entries
- Structure:
- UniProt: P07791
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: cotD (according to DBTBS)
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References