Difference between revisions of "LytH"
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1047 bp, 349 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1047 bp, 349 aa | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lipA]]'', ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lipA]]'', ''[[fisB]]'' |
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB15224]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB15224]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | ||
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<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=lytH_3321455_3322435_1 lytH] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=lytH_3321455_3322435_1 lytH] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigK]] {{PubMed|12813075}} | + | * '''[[Sigma factor]]:''' [[SigK]] {{PubMed|12813075}} |
* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 14:58, 10 February 2013
- Description: differentiation-associated peptidoglycan hydrolase involved in endospore cortex maturation
| Gene name | lytH |
| Synonyms | yunA, yutA |
| Essential | no |
| Product | peptidoglycan hydrolase |
| Function | endospore cortex maturation |
| Gene expression levels in SubtiExpress: lytH | |
| MW, pI | 39 kDa, 6.893 |
| Gene length, protein length | 1047 bp, 349 aa |
| Immediate neighbours | lipA, fisB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
cell wall/ other, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU32340
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: peptidase M23B family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O32130
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon: lytH PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Gavin J Horsburgh, Abdelmadjid Atrih, Simon J Foster
Characterization of LytH, a differentiation-associated peptidoglycan hydrolase of Bacillus subtilis involved in endospore cortex maturation.
J Bacteriol: 2003, 185(13);3813-20
[PubMed:12813075]
[WorldCat.org]
[DOI]
(P p)
