Difference between revisions of "HemN"

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|style="background:#ABCDEF;" align="center"|'''Function''' || heme biosynthesis  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || heme biosynthesis  
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU25500 hemN]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 5.534   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 5.534   

Revision as of 13:58, 7 August 2012

  • Description: anaerobic coproporphyrinogen III oxidase

Gene name hemN
Synonyms yqeR
Essential no
Product anaerobic coproporphyrinogen III oxidase
Function heme biosynthesis
Gene expression levels in SubtiExpress: hemN
MW, pI 41 kDa, 5.534
Gene length, protein length 1098 bp, 366 aa
Immediate neighbours hrcA, lepA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
HemN context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
HemN expression.png
























Categories containing this gene/protein

biosynthesis of cofactors

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU25500

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Coproporphyrinogen-III + 2 S-adenosyl-L-methionine = protoporphyrinogen-IX + 2 CO2 + 2 L-methionine + 2 5'-deoxyadenosine (according to Swiss-Prot)
  • Protein family: anaerobic coproporphyrinogen III oxidase family (according to Swiss-Prot)
  • Paralogous protein(s): HemZ

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information: There is a terminator between lepA and hemN with only little readthrough

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References