Difference between revisions of "YvyF"

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(Extended information on the protein)
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** ''[[yvyF]]-[[flgM]]-[[yvyG]]-[[flgK]]-[[flgL]]'' {{PubMed|8045879}}
 
** ''[[yvyF]]-[[flgM]]-[[yvyG]]-[[flgK]]-[[flgL]]'' {{PubMed|8045879}}
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yvyF_3640632_3641051_-1 yvyF] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:'''  
 
** ''[[comFA]]'': [[SigA]] {{PubMed|8412657}}
 
** ''[[comFA]]'': [[SigA]] {{PubMed|8412657}}
 
** ''[[yvyF]]'': [[SigD]] {{PubMed|8045879}}
 
** ''[[yvyF]]'': [[SigD]] {{PubMed|8045879}}
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** [[ComK]]: transcription activation {{PubMed|8412657}}
 
** [[ComK]]: transcription activation {{PubMed|8412657}}
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 07:36, 17 April 2012

  • Description: similar to flagellar protein

Gene name yvyF
Synonyms yviB
Essential no
Product unknown
Function unknown
MW, pI 16 kDa, 7.977
Gene length, protein length 417 bp, 139 aa
Immediate neighbours flgM, comFC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvyF context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

motility and chemotaxis

This gene is a member of the following regulons

ComK regulon, SigD regulon

The gene

Basic information

  • Locus tag: BSU35440

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

D B Mirel, P Lauer, M J Chamberlin
Identification of flagellar synthesis regulatory and structural genes in a sigma D-dependent operon of Bacillus subtilis.
J Bacteriol: 1994, 176(15);4492-500
[PubMed:8045879] [WorldCat.org] [DOI] (P p)

J A Londoño-Vallejo, D Dubnau
comF, a Bacillus subtilis late competence locus, encodes a protein similar to ATP-dependent RNA/DNA helicases.
Mol Microbiol: 1993, 9(1);119-31
[PubMed:8412657] [WorldCat.org] [DOI] (P p)