Difference between revisions of "CotD"
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* '''Operon:''' ''cotD'' (according to [http://dbtbs.hgc.jp/COG/prom/cotD.html DBTBS]) | * '''Operon:''' ''cotD'' (according to [http://dbtbs.hgc.jp/COG/prom/cotD.html DBTBS]) | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotD_2332784_2333011_-1 cotD] {{PubMed|22383849}} |
+ | |||
+ | * '''Sigma factor:''' [[SigK]] {{PubMed|15699190}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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** [[SpoIIID]]: transcription repression {{PubMed|7966271}} | ** [[SpoIIID]]: transcription repression {{PubMed|7966271}} | ||
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 08:45, 16 April 2012
- Description: spore coat protein (inner)
Gene name | cotD |
Synonyms | |
Essential | no |
Product | spore coat protein (inner) |
Function | resistance of the spore |
MW, pI | 8 kDa, 7.373 |
Gene length, protein length | 225 bp, 75 aa |
Immediate neighbours | ypsA, yprB |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
GerE regulon, SigK regulon, SpoIIID regulon
The gene
Basic information
- Locus tag: BSU22200
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: nhaC Na(+)/H(+) antiporter family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- inner spore coat PubMed
Database entries
- Structure:
- UniProt: P07791
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: cotD (according to DBTBS)
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References