Difference between revisions of "RapK"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
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* '''Operon:''' ''[[rapK]]-[[phrK]]'' {{PubMed|11466295}}
 
* '''Operon:''' ''[[rapK]]-[[phrK]]'' {{PubMed|11466295}}
  
* '''[[Sigma factor]]:''' [[SigH]] {{PubMed|11466295}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rapK_2062150_2063265_1 rapK] {{PubMed|22383849}}
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* '''Sigma factor:''' [[SigH]] {{PubMed|11466295}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[AbrB]]: transcription repression {{PubMed|20817675}}  
 
** [[AbrB]]: transcription repression {{PubMed|20817675}}  
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 07:36, 16 April 2012

Gene name rapK
Synonyms yobG
Essential no
Product response regulator aspartate phosphatase
Function control of ComA activity
Interactions involving this protein in SubtInteract: RapK
MW, pI 43 kDa, 5.06
Gene length, protein length 1113 bp, 371 aa
Immediate neighbours yozJ, phrK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RapK context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

genetic competence, protein modification, transcription factors and their control, quorum sensing

This gene is a member of the following regulons

AbrB regulon, SigH regulon

The gene

Basic information

  • Locus tag: BSU18910

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: control of ComA activity PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity: binding of PhrK inhibits RapK activity PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed