Difference between revisions of "FsrA"

From SubtiWiki
Jump to: navigation, search
Line 34: Line 34:
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 
{{SubtiWiki regulon|[[Fur regulon]]}}
 
{{SubtiWiki regulon|[[Fur regulon]]}}
=The [[FsrA regulon]]: ''[[citB]]'', ''[[leuC]]-[[leuD]]'', ''[[lutB]]'', ''[[sdhC]]''=
+
=The [[FsrA regulon]]''=
 +
 
 
=The gene=
 
=The gene=
  

Revision as of 16:20, 8 March 2012

  • Description: regulatory RNA

Gene name fsrA
Synonyms
Essential no
Product sRNA FsrA
Function inhibition of sdhC translation
Gene length aaa bp
Immediate neighbours ykuI, ykuJ
Gene sequence (+200bp)
Genetic context
FsrA context.jpg



Categories containing this gene/protein

carbon core metabolism, ncRNA

This gene is a member of the following regulons

Fur regulon

The FsrA regulon

The gene

Basic information

  • Locus tag:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: no entry
  • GEO entry: GEO {{PubMed|22389480}
  • Structure:

Additional information

  • Swiss prot entry:
  • KEGG entry: no entry
  • E.C. number:

Additional information

The RNA

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: hybridizes to sdhC, citB, lutB, and leuC-leuD mRNAs and inhibits their translation. PubMed

Extended information on the RNA

  • Kinetic information

Database entries

  • Structure:

Additional information

Expression and regulation

  • Operon:
  • Regulation: induced by iron starvation (Fur) PubMed
  • Regulatory mechanism: Fur: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:

Labs working on this gene/RNA

John Helmann, Cornell University, USA Homepage

Your additional remarks

References