Difference between revisions of "YoaC"

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* '''Locus tag:''' BSU18550
 
* '''Locus tag:''' BSU18550
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[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yoaC_2022561_2024024_-1 Expression]
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 10:38, 25 January 2012

  • Description: similar to xylulokinase

Gene name yoaC
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 53 kDa, 4.858
Gene length, protein length 1461 bp, 487 aa
Immediate neighbours yoaB, yoaD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YoaC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

S-box

The gene

Basic information

  • Locus tag: BSU18550

Expression

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism: S-box: transcription termination/ antitermination, the S-box riboswitch binds S-adenosylmethionine resulting in termination PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jerneja Tomsic, Brooke A McDaniel, Frank J Grundy, Tina M Henkin
Natural variability in S-adenosylmethionine (SAM)-dependent riboswitches: S-box elements in bacillus subtilis exhibit differential sensitivity to SAM In vivo and in vitro.
J Bacteriol: 2008, 190(3);823-33
[PubMed:18039762] [WorldCat.org] [DOI] (I p)

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)