Difference between revisions of "Btr"
Line 66: | Line 66: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
− | * '''Catalyzed reaction/ biological activity:''' transcription activation of the ''[[feuA]]-[[feuB]]-[[feuC]]-[[ybbA]]'' operon in the presence of bacillibactin or enterobactin | + | * '''Catalyzed reaction/ biological activity:''' |
+ | ** binding of a direct repeat in the ''[[feuA]]'' promoter region and transcription activation of the ''[[feuA]]-[[feuB]]-[[feuC]]-[[ybbA]]'' operon in the presence of bacillibactin or enterobactin {{PubMed|17725565,22210890}} | ||
* '''Protein family:''' | * '''Protein family:''' | ||
Line 80: | Line 81: | ||
* '''Modification:''' | * '''Modification:''' | ||
− | * '''Cofactor(s):''' enterobactin, bacillibactin (co-activators) | + | * '''Cofactor(s):''' enterobactin, bacillibactin (co-activators) {{PubMed|17725565}} |
− | * '''Effectors of protein activity:''' enterobactin, bacillibactin (co-activators) | + | * '''Effectors of protein activity:''' enterobactin, bacillibactin (co-activators) {{PubMed|17725565}} |
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
Line 112: | Line 113: | ||
** [[Fur]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12354229 PubMed] | ** [[Fur]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12354229 PubMed] | ||
− | * '''Additional information:''' the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed] | + | * '''Additional information:''' |
+ | ** the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed] | ||
=Biological materials = | =Biological materials = | ||
Line 134: | Line 136: | ||
=References= | =References= | ||
− | <pubmed>12884008,17725565,,12354229, </pubmed> | + | <pubmed>12884008,17725565, 22210890,12354229, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 17:25, 4 January 2012
- Description: transcription activator (AraC family DNA-binding domain fused to FeuA-like substrate-binding domain), regulation of the feuA-feuB-feuC-ybbA operon
Gene name | btr |
Synonyms | ybbB, yzbC |
Essential | no |
Product | transcription activator (AraC family) |
Function | regulation of iron acquisition |
Metabolic function and regulation of this protein in SubtiPathways: Stress, Metal ion homeostasis | |
MW, pI | 60 kDa, 6.433 |
Gene length, protein length | 1587 bp, 529 aa |
Immediate neighbours | feuA, ybbC |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
acquisition of iron, iron metabolism, transcription factors and their control
This gene is a member of the following regulons
The Btr regulon:
The gene
Basic information
- Locus tag: BSU01640
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): enterobactin, bacillibactin (co-activators) PubMed
- Effectors of protein activity: enterobactin, bacillibactin (co-activators) PubMed
Database entries
- Structure:
- UniProt: P40408
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: btr PubMed
- Additional information:
- the mRNA is very stable (half-life > 15 min) PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References