Difference between revisions of "TagU"

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{{SubtiWiki regulon|[[LytR regulon]]}},
 
{{SubtiWiki regulon|[[LytR regulon]]}},
 
{{SubtiWiki regulon|[[SigX regulon]]}}
 
{{SubtiWiki regulon|[[SigX regulon]]}}
 
+
=The [[LytR regulon]]:=
 +
* ''[[lytA]]-[[lytB]]-[[lytC]]'', ''[[lytR]]''
 
=The gene=
 
=The gene=
  

Revision as of 11:25, 18 December 2010

Gene name lytR
Synonyms
Essential no
Product negative regulator for lytA-lytB-lytC and lytR expression
Function regulation of cell separation and autolysis
MW, pI 34 kDa, 9.527
Gene length, protein length 918 bp, 306 aa
Immediate neighbours lytA, mnaA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
LytR context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

cell wall degradation/ turnover, transcription factors and their control, cell envelope stress proteins (controlled by SigM, W, X, Y), membrane proteins

This gene is a member of the following regulons

LytR regulon, SigX regulon

The LytR regulon:

The gene

Basic information

  • Locus tag: BSU35650

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: lytR/cpsA/psr regulatory protein family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

X Huang, J D Helmann
Identification of target promoters for the Bacillus subtilis sigma X factor using a consensus-directed search.
J Mol Biol: 1998, 279(1);165-73
[PubMed:9636707] [WorldCat.org] [DOI] (P p)

V Lazarevic, P Margot, B Soldo, D Karamata
Sequencing and analysis of the Bacillus subtilis lytRABC divergon: a regulatory unit encompassing the structural genes of the N-acetylmuramoyl-L-alanine amidase and its modifier.
J Gen Microbiol: 1992, 138(9);1949-61
[PubMed:1357079] [WorldCat.org] [DOI] (P p)