Difference between revisions of "NtdR"

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* '''Description:''' transcription activator of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]'' operon <br/><br/>
+
* '''Description:''' transcription activator of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]-[[glcP]]'' operon <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional regulator ([[LacI family]])  
 
|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional regulator ([[LacI family]])  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]'' operon  
+
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]-[[glcP]]'' operon  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 6.645   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 6.645   
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=== Basic information/ Evolution ===
 
=== Basic information/ Evolution ===
  
* '''Catalyzed reaction/ biological activity:'''  
+
* '''Catalyzed reaction/ biological activity:''' transcription activation of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]-[[glcP]]'' operon {{PubMed|17056753}}
  
 
* '''Protein family:''' [[LacI family]]
 
* '''Protein family:''' [[LacI family]]
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=References=
 
=References=
  
<pubmed>14612444  </pubmed>
+
<pubmed>14612444  17056753 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:58, 30 May 2010

Gene name ntdR
Synonyms yhjM
Essential no
Product transcriptional regulator (LacI family)
Function regulation of the ntdA-ntdB-ntdC-glcP operon
MW, pI 37 kDa, 6.645
Gene length, protein length 987 bp, 329 aa
Immediate neighbours ntdA, yhjN
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YhjM context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU10560

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Takashi Inaoka, Kozo Ochi
Glucose uptake pathway-specific regulation of synthesis of neotrehalosadiamine, a novel autoinducer produced in Bacillus subtilis.
J Bacteriol: 2007, 189(1);65-75
[PubMed:17056753] [WorldCat.org] [DOI] (P p)

Takashi Inaoka, Kosaku Takahashi, Hiroshi Yada, Mitsuru Yoshida, Kozo Ochi
RNA polymerase mutation activates the production of a dormant antibiotic 3,3'-neotrehalosadiamine via an autoinduction mechanism in Bacillus subtilis.
J Biol Chem: 2004, 279(5);3885-92
[PubMed:14612444] [WorldCat.org] [DOI] (P p)