Difference between revisions of "Usd"

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* '''Description:''' putative spoIIID leader peptide <br/><br/>
+
* '''Description:''' putative ''[[spoIIID]]'' leader peptide <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || putative spoIIID leader peptide  
+
|style="background:#ABCDEF;" align="center"| '''Product''' || putative ''[[spoIIID]]'' leader peptide  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || required for translation of spoIIID
+
|style="background:#ABCDEF;" align="center"|'''Function''' || required for translation of [[SpoIIID]]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 4 kDa, 10.514   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 4 kDa, 10.514   
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=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[usd]]-[[spoIIID]]-[[mbl]]-[[flhO]]-[[flhP]]'' {{PubMed|9023218,7836311}}
  
* '''Operon:'''
+
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|9023218}}  
 
 
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}}
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|9023218}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
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=References=
 
=References=
  
<pubmed>,9023218, </pubmed>
+
<pubmed>,9023218, 7836311</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 22:42, 29 January 2010

  • Description: putative spoIIID leader peptide

Gene name usd
Synonyms
Essential no
Product putative spoIIID leader peptide
Function required for translation of SpoIIID
MW, pI 4 kDa, 10.514
Gene length, protein length 108 bp, 36 aa
Immediate neighbours spoIIID, ywoH
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Usd context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU36430

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References