Difference between revisions of "SufS"

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(Basic information/ Evolution)
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* '''Description:''' probable cysteine desulfurase <br/><br/>
+
* '''Description:''' cysteine desulfurase <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''csd''
+
|''sufS''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yurW, sufS ''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yurW, csd ''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
+
|style="background:#ABCDEF;" align="center"| '''Product''' || cysteine desulfurase
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || formation of iron-sulphur clusters in proteins  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || formation of iron-sulphur clusters in proteins  
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1218 bp, 406 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1218 bp, 406 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[iscU]]'', ''[[yurX]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sufU]]'', ''[[sufD]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15258&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15258&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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=References=
 
=References=
 
+
<pubmed> 20097860 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 11:04, 26 January 2010

  • Description: cysteine desulfurase

Gene name sufS
Synonyms yurW, csd
Essential yes PubMed
Product cysteine desulfurase
Function formation of iron-sulphur clusters in proteins
MW, pI 44 kDa, 5.199
Gene length, protein length 1218 bp, 406 aa
Immediate neighbours sufU, sufD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Csd context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU32690

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine (according to Swiss-Prot)
  • Protein family: Csd subfamily (according to Swiss-Prot)

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Alexander G Albrecht, Daili J A Netz, Marcus Miethke, Antonio J Pierik, Olaf Burghaus, Florian Peuckert, Roland Lill, Mohamed A Marahiel
SufU is an essential iron-sulfur cluster scaffold protein in Bacillus subtilis.
J Bacteriol: 2010, 192(6);1643-51
[PubMed:20097860] [WorldCat.org] [DOI] (I p)