Difference between revisions of "RbsD"
| Line 89: | Line 89: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[rbsR]]-[[rbsK]]-[[rbsD]]-[[rbsA]]-[[rbsC]]-[[rbsB]]'' {{PubMed|7921236}} | ||
| − | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|7511775}} | |
| − | |||
| − | * '''[[Sigma factor]]:''' [[SigA]] | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** repressed by glucose ([[CcpA]]) {{PubMed|7921236}} | ||
** expressed upon transition into the stationary phase ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/7592460 PubMed] | ** expressed upon transition into the stationary phase ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/7592460 PubMed] | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[CcpA]]: transcription repression {{PubMed|7921236}} | ||
** [[AbrB]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/7592460 PubMed] | ** [[AbrB]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/7592460 PubMed] | ||
| Line 122: | Line 123: | ||
=References= | =References= | ||
| − | <pubmed>10092453,16872404,,7592460,12738765 7921236, </pubmed> | + | <pubmed>10092453,16872404,,7592460,12738765 7921236, 7511775</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 11:08, 9 January 2010
- Description: ribose ABC transporter (membrane protein)
| Gene name | rbsD |
| Synonyms | |
| Essential | no |
| Product | ribose ABC transporter (membrane protein) |
| Function | ribose uptake |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 14 kDa, 4.987 |
| Gene length, protein length | 393 bp, 131 aa |
| Immediate neighbours | rbsK, rbsA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU35930
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: RbsD subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure: 1OGD (complex with D-ribose)
- UniProt: P36946
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
