Difference between revisions of "ComFA"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
Line 87: Line 87:
  
 
=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[comFA]]-[[comFB]]-[[comFC]]-[[yvyF]]-[[flgM]]-[[yvyG]]-[[flgK]]-[[flgL]]'' {{PubMed|8412657}}
  
* '''Operon:'''  
+
* '''[[Sigma factor]]:''' ''[[comFA]]'': [[SigA]] {{PubMed|8412657}}
 
 
* '''[[Sigma factor]]:'''  
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[ComK]]: transcription activation {{PubMed|8412657}}
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 21:45, 30 December 2009

  • Description: late competence protein required for DNA binding and uptake

Gene name comFA
Synonyms
Essential no
Product DNA-binding protein
Function genetic transformation
MW, pI 52 kDa, 9.824
Gene length, protein length 1389 bp, 463 aa
Immediate neighbours comFB, yviA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
ComFA context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU35470

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: helicase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane PubMed,localizes to cell poles in competent cells PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References