Difference between revisions of "YvrO"

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=Expression and regulation=
 
=Expression and regulation=
 
+
* '''Operon:''' ''[[yvrP]]-[[yvrO]]-[[yvrN]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yvrPON.html DBTBS])
* '''Operon:'''  
 
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[ComK]]: transcription activation {{PubMed|11948146}}
  
 
* '''Additional information:'''  
 
* '''Additional information:'''  
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=References=
 
=References=
  
<pubmed>10092453,, </pubmed>
+
<pubmed>10092453,11948146, </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:16, 28 December 2009

  • Description: similar to amino acid ABC transporter (ATP-binding protein)

Gene name yvrO
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 25 kDa, 9.696
Gene length, protein length 687 bp, 229 aa
Immediate neighbours yvrN, yvrP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvrO context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU33270

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Mitsuo Ogura, Hirotake Yamaguchi, Kazuo Kobayashi, Naotake Ogasawara, Yasutaro Fujita, Teruo Tanaka
Whole-genome analysis of genes regulated by the Bacillus subtilis competence transcription factor ComK.
J Bacteriol: 2002, 184(9);2344-51
[PubMed:11948146] [WorldCat.org] [DOI] (P p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)