Difference between revisions of "CotT"
| Line 73: | Line 73: | ||
* '''Localization:''' spore wall (according to Swiss-Prot) | * '''Localization:''' spore wall (according to Swiss-Prot) | ||
| − | + | ''Italic text'' | |
=== Database entries === | === Database entries === | ||
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''cotT'' {{PubMed|2546006}} |
| − | * '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}} | + | * '''[[Sigma factor]]:''' [[SigK]] {{PubMed|2546006,15699190,15383836}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** expressed late during sporulation in the mother cell ([[SigK]]) {{PubMed|2546006,15699190,15383836}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[SpoIIID]]: transcription activation {{PubMed|15383836}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 120: | Line 122: | ||
=References= | =References= | ||
| − | <pubmed>10714992,1917883,, </pubmed> | + | <pubmed>10714992,1917883,2546006,15699190, 15383836 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:05, 29 September 2009
- Description: spore coat protein (inner)
| Gene name | cotT |
| Synonyms | |
| Essential | no |
| Product | spore coat protein (inner) |
| Function | resistance of the spore |
| MW, pI | 12 kDa, 9.466 |
| Gene length, protein length | 321 bp, 107 aa |
| Immediate neighbours | ctaO, yjeA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU12090
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: spore wall (according to Swiss-Prot)
Italic text
Database entries
- Structure:
- UniProt: P11863
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: cotT PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Arthur Aronson, Purdue University, West Lafayette, USA homepage
Your additional remarks
References
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836]
[WorldCat.org]
[DOI]
(I p)
H Takamatsu, T Kodama, A Imamura, K Asai, K Kobayashi, T Nakayama, N Ogasawara, K Watabe
The Bacillus subtilis yabG gene is transcribed by SigK RNA polymerase during sporulation, and yabG mutant spores have altered coat protein composition.
J Bacteriol: 2000, 182(7);1883-8
[PubMed:10714992]
[WorldCat.org]
[DOI]
(P p)
N Bourne, P C FitzJames, A I Aronson
Structural and germination defects of Bacillus subtilis spores with altered contents of a spore coat protein.
J Bacteriol: 1991, 173(20);6618-25
[PubMed:1917883]
[WorldCat.org]
[DOI]
(P p)
A I Aronson, H Y Song, N Bourne
Gene structure and precursor processing of a novel Bacillus subtilis spore coat protein.
Mol Microbiol: 1989, 3(3);437-44
[PubMed:2546006]
[WorldCat.org]
[DOI]
(P p)
