Difference between revisions of "YlnE"

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=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU15620
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
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* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O34632 O34632]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O34632 O34632]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU15620 BSU15620]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU15620]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 16:17, 3 June 2009

  • Description: probably siroheme ferrochelatase

Gene name ylnE
Synonyms
Essential no
Product probably siroheme ferrochelatase
Function siroheme biosynthesis , sulfite reduction
MW, pI 28 kDa, 6.063
Gene length, protein length 783 bp, 261 aa
Immediate neighbours ylnD, ylnF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YlnE context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU15620

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Siroheme + 2 H+ = sirohydrochlorin + Fe2+ (according to Swiss-Prot)
  • Protein family: SirB subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: repressed by casamino acids PubMed, repressed in the presence of cysteine (CymR)
  • Regulatory mechanism: CymR: transcription repression, S-box Element: transcriptional antitermination
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Mäder et al. (2002) Transcriptome and Proteome Analysis of Bacillus subtilis Gene Expression Modulated by Amino Acid Availability. J. Bacteriol 184: 1844288-4295 PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed