Difference between revisions of "YfjR"

From SubtiWiki
Jump to: navigation, search
Line 35: Line 35:
 
=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU07990
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
Line 80: Line 80:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O34969 O34969]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O34969 O34969]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU07990 BSU07990]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU07990]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 16:00, 3 June 2009

  • Description: similar to 3-hydroxyisobutyrate dehydrogenase

Gene name yfjR
Synonyms
Essential no
Product 3-hydroxyisobutyrate dehydrogenase
Function unknown
MW, pI 27 kDa, 4.782
Gene length, protein length 783 bp, 261 aa
Immediate neighbours pdaA, yfjQ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfjR context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU07990

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: 3-hydroxyisobutyrate dehydrogenase family (according to Swiss-Prot)
  • Paralogous protein(s): YkwC

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated on ser/ thr/ tyr PubMed
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Lévine et al. (2006) Analysis of the dynamic Bacillus subtilis Ser/Thr/Tyr phosphoproteome implicated in a wide variety of cellular processes. Proteomics 6: 2157-2173 PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed