Difference between revisions of "KdgA"
| Line 35: | Line 35: | ||
=== Basic information === | === Basic information === | ||
| − | * '''Locus tag:''' | + | * '''Locus tag:''' BSU22100 |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| Line 80: | Line 80: | ||
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P50846 P50846] | * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P50846 P50846] | ||
| − | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+ | + | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU22100] |
* '''E.C. number:''' [http://www.expasy.org/enzyme/4.1.3.16 4.1.3.16] | * '''E.C. number:''' [http://www.expasy.org/enzyme/4.1.3.16 4.1.3.16] | ||
Revision as of 13:53, 3 June 2009
- Description: 2-dehydro-3-deoxy-phosphogluconate aldolase
| Gene name | kdgA |
| Synonyms | |
| Essential | no |
| Product | 2-dehydro-3-deoxy-phosphogluconate aldolase |
| Function | utilization of galacturonic acid |
| MW, pI | 20 kDa, 5.273 |
| Gene length, protein length | 588 bp, 196 aa |
| Immediate neighbours | kdgT, kdgK |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU22100
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 4-hydroxy-2-oxoglutarate = pyruvate + glyoxylate (according to Swiss-Prot)
- Protein family: anti-sigma-factor family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- Swiss prot entry: P50846
- KEGG entry: [3]
- E.C. number: 4.1.3.16
Additional information
Expression and regulation
- Operon:
- Regulation: repressed by glucose (CcpA)
- Regulatory mechanism: CcpA: transcription repression
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
