Difference between revisions of "RsmG"
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | {{SubtiWiki regulon|[[ComK regulon]]}} | + | {{SubtiWiki regulon|[[ComK regulon]]}}, |
| + | {{SubtiWiki regulon|[[DnaA regulon]]}} | ||
=The gene= | =The gene= | ||
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rsmG_4208870_4209589_-1 rsmG] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rsmG_4208870_4209589_-1 rsmG] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
** [[ComK]]: transcription activation {{PubMed|11948146}} | ** [[ComK]]: transcription activation {{PubMed|11948146}} | ||
| + | ** [[DnaA]]: transcription repression {{PubMed|26020636}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
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=References= | =References= | ||
| − | <pubmed>17573471 11948146 11807071</pubmed> | + | <pubmed>17573471 11948146 11807071 26020636</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 13:03, 1 June 2015
- Description: 7-methylguanosine methyltransferase specific for the 16S rRNA, glucose-inhibited division protein
| Gene name | gidB |
| Synonyms | |
| Essential | no |
| Product | 7-methylguanosine methyltransferase specific for the 16S rRNA |
| Function | rRNA modification |
| Gene expression levels in SubtiExpress: rsmG | |
| MW, pI | 26 kDa, 6.603 |
| Gene length, protein length | 717 bp, 239 aa |
| Immediate neighbours | noc, gidA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU41000
Phenotypes of a mutant
low-level resistance to streptomycin, increased level of streptomycin-resistant rpsL mutants (200 times higher than in the wild type) PubMed
Database entries
- BsubCyc: BSU41000
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: methylates the N7 position of nucleotide G535 in 16S rRNA PubMed
- Protein family: RNA methyltransferase rsmG family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU41000
- Structure: 1XDZ
- UniProt: P25813
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
- number of protein molecules per cell (minimal medium with glucose and ammonium): 156 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
