Difference between revisions of "RpmA"

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* '''Modification:'''
 
* '''Modification:'''
 
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** the N-terminal extension is cleaved off by [[Prp]] {{PubMed|25388641}}
 
* '''[[Cofactors]]:'''
 
* '''[[Cofactors]]:'''
  
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=References=
 
=References=
<pubmed>19653700 8969504 23002217 24335279</pubmed>
+
<pubmed>19653700 8969504 23002217 24335279 25388641</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 12:31, 10 December 2014

Gene name rpmA
Synonyms
Essential yes PubMed
Product ribosomal protein L27 (BL24)
Function translation
Gene expression levels in SubtiExpress: rpmA
Interactions involving this protein in SubtInteract: RpmA
MW, pI 10 kDa, 10.764
Gene length, protein length 282 bp, 94 aa
Immediate neighbours spo0B, ysxB
Sequences Protein DNA DNA_with_flanks
Genetic context
RpmA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpmA expression.png















Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU27940

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

  • the protein is significantly underrepresented in 45S assembly intermediates that accumulate upon depletion of RbgA PubMed

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 650 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 1644 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References