Difference between revisions of "Pdp"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39400&redirect=T BSU39400] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/deoR-dra-nupC-pdp.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/deoR-dra-nupC-pdp.html] | ||
| Line 96: | Line 97: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39400&redirect=T BSU39400] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1BRW 1BRW] (Geobacillus stearothermophilus) | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1BRW 1BRW] (Geobacillus stearothermophilus) | ||
Revision as of 15:12, 2 April 2014
- Description: pyrimidine nucleoside phosphorylase
| Gene name | pdp |
| Synonyms | |
| Essential | no |
| Product | pyrimidine nucleoside phosphorylase |
| Function | pyrimidine interconversion |
| Gene expression levels in SubtiExpress: pdp | |
| Metabolic function and regulation of this protein in SubtiPathways: pdp | |
| MW, pI | 46 kDa, 4.765 |
| Gene length, protein length | 1299 bp, 433 aa |
| Immediate neighbours | hutM, nupC |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU39400
Phenotypes of a mutant
Database entries
- BsubCyc: BSU39400
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: A pyrimidine nucleoside + phosphate = a pyrimidine base + alpha-D-ribose 1-phosphate (according to Swiss-Prot)
- Protein family: thymidine/pyrimidine-nucleoside phosphorylase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU39400
- Structure: 1BRW (Geobacillus stearothermophilus)
- UniProt: P39142
- KEGG entry: [3]
- E.C. number: 2.4.2.2
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
