Difference between revisions of "SpoIIID"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' two DNA-binding regions: HTH at the N-terminus and a basic region near the C-terminus {{PubMed|20061473}} | + | * '''[[Domains]]:''' two DNA-binding regions: HTH at the N-terminus and a basic region near the C-terminus {{PubMed|20061473}} |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIID_3748421_3748702_-1 spoIIID] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIID_3748421_3748702_-1 spoIIID] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigE]] {{PubMed|9023218}} | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|9023218}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
| − | + | <pubmed>15383836,1469717,7896717,1900494,8231808,9023218,2112673,1691789,10788508,1744038,7966271,2514119,1518043,17693505,9006059, 20061473 17890309 17693499 7836311 24584501 22463703</pubmed> | |
| − | <pubmed>15383836,1469717,7896717,1900494,8231808,9023218,2112673,1691789,10788508,1744038,7966271,2514119,1518043,17693505,9006059, 20061473 17890309 17693499 7836311</pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:22, 4 March 2014
- Description: transcriptional regulator (repressor or activator) of a subset of sigma-E-dependent genes
| Gene name | spoIIID |
| Synonyms | |
| Essential | no |
| Product | transcriptional regulator |
| Function | regulation of mother cell gene expression |
| Gene expression levels in SubtiExpress: spoIIID | |
| Metabolic function and regulation of this protein in SubtiPathways: spoIIID | |
| MW, pI | 10 kDa, 9.496 |
| Gene length, protein length | 279 bp, 93 aa |
| Immediate neighbours | mbl, usd |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transcription factors and their control, sporulation proteins
This gene is a member of the following regulons
The SpoIIID regulon
The gene
Basic information
- Locus tag: BSU36420
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: binds its DNA targets as a monomeric protein (possible due to the two DNA-binding motifs) PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: two DNA-binding regions: HTH at the N-terminus and a basic region near the C-terminus PubMed
- Modification:
- Effectors of protein activity:
Database entries
- Structure: 2L0K (complex with DNA)
- UniProt: P15281
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
