Difference between revisions of "ThiE"
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 666 bp, 222 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 666 bp, 222 aa | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[efeU]]'', ''[[thiM]]'' |
|- | |- | ||
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38290 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38290 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38290 DNA_with_flanks] | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38290 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38290 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38290 DNA_with_flanks] | ||
| Line 37: | Line 37: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
| − | + | <br/><br/> | |
| − | |||
| − | |||
| − | |||
| − | |||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| Line 111: | Line 107: | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=thiE_3930707_3931375_-1 thiE] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=thiE_3930707_3931375_-1 thiE] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigA]] {{PubMed|9139923}} | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|9139923}} |
* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 16:30, 21 June 2013
- Description: thiamine-phosphate pyrophosphorylase
| Gene name | thiE |
| Synonyms | thiC, ipa-26d, ywbK |
| Essential | no |
| Product | thiamine-phosphate pyrophosphorylase |
| Function | biosynthesis of thiamine by 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate to yield thiamine phosphate |
| Gene expression levels in SubtiExpress: thiE | |
| Metabolic function and regulation of this protein in SubtiPathways: Thiamin | |
| MW, pI | 23 kDa, 5.058 |
| Gene length, protein length | 666 bp, 222 aa |
| Immediate neighbours | efeU, thiM |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU38290
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-methyl-5-(2-phosphono-oxyethyl)thiazole = diphosphate + thiamine phosphate (according to Swiss-Prot)
- Protein family: TMP-PPase family (according to Swiss-Prot)
- Paralogous protein(s): TenI
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 1G6C
- UniProt: P39594
- KEGG entry: [3]
- E.C. number: 2.5.1.3
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications
