Difference between revisions of "EfeB"

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Revision as of 15:55, 21 June 2013

  • Description: elemental iron uptake system (binding protein)

Gene name ywbN
Synonyms ipa-29d
Essential no
Product elemental iron uptake system (binding protein)
Function iron uptake
Gene expression levels in SubtiExpress: ywbN
Interactions involving this protein in SubtInteract: YwbN
Metabolic function and regulation of this protein in SubtiPathways:
Protein secretion
MW, pI 45 kDa, 8.64
Gene length, protein length 1248 bp, 416 aa
Immediate neighbours ywbO, ywbM
Sequences Protein DNA DNA_with_flanks
Genetic context
YwbN context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YwbN expression.png















Categories containing this gene/protein

transporters/ other, acquisition of iron, iron metabolism, cell envelope stress proteins (controlled by SigM, V, W, X, Y), membrane proteins

This gene is a member of the following regulons

Fur regulon, SigM regulon, SigW regulon, SigX regulon

The gene

Basic information

  • Locus tag: BSU38260

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: DyP-type peroxidase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Jan Maarten van Dijl, Groningen, Netherlands

Your additional remarks

References