Difference between revisions of "SpoIIAA"

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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIAA_2444645_2444998_-1 spoIIAA] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIAA_2444645_2444998_-1 spoIIAA] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:'''  
 
** ''[[dacF]]'': [[SigF]], [[SigG]]
 
** ''[[dacF]]'': [[SigF]], [[SigG]]
 
** ''[[spoIIAA]]'': [[SigH]]
 
** ''[[spoIIAA]]'': [[SigH]]
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=References=
 
=References=
'''Additional publications:''' {{PubMed|20817675,22312331}}
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<pubmed>1391042,8358793,8955289,15023063,15351644,9077448,10323866,8820658,8622920,16824103,7570023,10476035,8932322,8764398,8764397,12676949,9826498,9826499,14744853,9642177,11684022,8846916,11298272,1948031,3114419,11846550,15201047,2123551,8168129,,1556084,15687200,12850135 16493705 17218307, 20298743 10049355 20817675,22312331</pubmed>
 
 
<pubmed>1391042,8358793,8955289,15023063,15351644,9077448,10323866,8820658,8622920,16824103,7570023,10476035,8932322,8764398,8764397,12676949,9826498,9826499,14744853,9642177,11684022,8846916,11298272,1948031,3114419,11846550,15201047,2123551,8168129,,1556084,15687200,12850135 16493705 17218307, 20298743 10049355 </pubmed>
 
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 20:32, 18 June 2013

  • Description: anti-anti-SigF

Gene name spoIIAA
Synonyms
Essential no
Product anti-anti-SigF
Function control of SigF activity
Gene expression levels in SubtiExpress: spoIIAA
Interactions involving this protein in SubtInteract: SpoIIAA
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 12 kDa, 5.855
Gene length, protein length 351 bp, 117 aa
Immediate neighbours spoIIAB, dacF
Sequences Protein DNA DNA_with_flanks
Genetic context
SpoIIAA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpoIIAA expression.png















Categories containing this gene/protein

sigma factors and their control, sporulation proteins, phosphoproteins

This gene is a member of the following regulons

AbrB regulon, SigF regulon, SigG regulon, SigH regulon, SinR regulon, Spo0A regulon

The gene

Basic information

  • Locus tag: BSU23470

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: anti-sigma-factor antagonist family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1TIL (complex with SpoIIAB, Geobacillus stearothermophilus), 1AUZ (NMR)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: repressed by glucose (5.2-fold) PubMed, dacF: expressed during sporulation, spoIIAA: expressed early during sporulation
    • expressed under conditions that trigger sporulation (Spo0A) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References