Difference between revisions of "PhrK"

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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=phrK_2063262_2063384_1 phrK] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=phrK_2063262_2063384_1 phrK] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigH]] {{PubMed|11466295}}
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* '''[[Sigma factor]]:''' [[SigH]] {{PubMed|11466295}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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=References=
 
=References=
'''Additional publications:''' {{PubMed|20817675}}
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<pubmed> 11466295 16816200,20817675</pubmed>
<pubmed> 11466295 16816200,</pubmed>
 
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 20:15, 18 June 2013

Gene name phrK
Synonyms
Essential no
Product phosphatase (RapK) regulator
Function control of ComA activity
Gene expression levels in SubtiExpress: phrK
Interactions involving this protein in SubtInteract: PhrK
MW, pI 3 kDa, 8.158
Gene length, protein length 120 bp, 40 aa
Immediate neighbours rapK, yobH
Sequences Protein DNA DNA_with_flanks
Genetic context
PhrK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PhrK expression.png















Categories containing this gene/protein

genetic competence, protein modification, transcription factors and their control, quorum sensing, short peptides

This gene is a member of the following regulons

AbrB regulon, SigH regulon

The gene

Basic information

  • Locus tag: BSU18920

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: inhibits RapK activity PubMed
  • Protein family: RAP family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References