Difference between revisions of "YlbQ"

From SubtiWiki
Jump to: navigation, search
Line 41: Line 41:
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 +
{{SubtiWiki regulon|[[Spx regulon]]}}
  
  
Line 107: Line 108:
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylbQ_1577409_1578305_1 ylbQ] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylbQ_1577409_1578305_1 ylbQ] {{PubMed|22383849}}
  
* '''[[Sigma factor]]:'''  
+
* '''[[Sigma factor]]:''' [[SigA]]  {{PubMed|23894131}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** induced by diamide stess (thiol depletion) ([[Spx]]) {{PubMed|23894131}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[Spx]]: transcription activation {{PubMed|23894131}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
Line 135: Line 138:
 
=References=
 
=References=
 
==Operon and expression==
 
==Operon and expression==
<pubmed> 20308541 </pubmed>
+
<pubmed> 20308541 23894131</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 12:28, 1 August 2013

  • Description: 2-dehydropantoate 2-reductase

Gene name ylbQ
Synonyms
Essential no
Product 2-dehydropantoate 2-reductase
Function biosynthesis of coenzyme A
Gene expression levels in SubtiExpress: ylbQ
MW, pI 33 kDa, 5.857
Gene length, protein length 894 bp, 298 aa
Immediate neighbours ylbP, bshC
Sequences Protein DNA DNA_with_flanks
Genetic context
YlbQ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YlbQ expression.png















Categories containing this gene/protein

biosynthesis of cofactors

This gene is a member of the following regulons

Spx regulon


The gene

Basic information

  • Locus tag: BSU15110

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: (R)-pantoate + NADP+ = 2-dehydropantoate + NADPH (according to Swiss-Prot)
  • Protein family: ketopantoate reductase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]

Additional information

Expression and regulation

  • Regulation:
    • induced by diamide stess (thiol depletion) (Spx) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Operon and expression