Difference between revisions of "Med"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU11300&redirect=T BSU11300]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/med-comZ.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/med-comZ.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU11300&redirect=T BSU11300]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 13:24, 2 April 2014

  • Description: lipoprotein, positive regulator of comK, stimulates KinD-dependent phosphorylation of Spo0A

Gene name med
Synonyms yjaW
Essential no
Product positive regulator of comK
Function regulation of competence
Gene expression levels in SubtiExpress: med
Metabolic function and regulation of this protein in SubtiPathways:
Protein secretion
MW, pI 35 kDa, 4.599
Gene length, protein length 951 bp, 317 aa
Immediate neighbours yjaV, comZ
Sequences Protein DNA DNA_with_flanks
Genetic context
Med context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Med expression.png
























Categories containing this gene/protein

genetic competence

This gene is a member of the following regulons

Spo0A regulon

The gene

Basic information

  • Locus tag: BSU11300

Phenotypes of a mutant

  • impaired biofilm formation PubMed


Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: BMP lipoprotein family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additonal publications: PubMed