Difference between revisions of "KdgK"
| Line 27: | Line 27: | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
|- | |- | ||
| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=kdgK_2323601_2324575_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:kdgK_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=kdgK_2323601_2324575_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:kdgK_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU22110]] |
|- | |- | ||
|} | |} | ||
Revision as of 13:43, 16 May 2013
- Description: 2-dehydro-3-deoxygluconokinase
| Gene name | kdgK |
| Synonyms | |
| Essential | no |
| Product | 2-dehydro-3-deoxygluconokinase |
| Function | utilization of galacturonic acid |
| Gene expression levels in SubtiExpress: kdgK | |
| MW, pI | 34 kDa, 5.681 |
| Gene length, protein length | 972 bp, 324 aa |
| Immediate neighbours | kdgA, kdgR |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU22110
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + 2-dehydro-3-deoxy-D-gluconate = ADP + 6-phospho-2-dehydro-3-deoxy-D-gluconate (according to Swiss-Prot)
- Protein family: anti-sigma-factor antagonist family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P50845
- KEGG entry: [3]
- E.C. number: 2.7.1.45
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Petar Pujic, Rozenn Dervyn, Alexei Sorokin, S Dusko Ehrlich
The kdgRKAT operon of Bacillus subtilis: detection of the transcript and regulation by the kdgR and ccpA genes.
Microbiology (Reading): 1998, 144 ( Pt 11);3111-3118
[PubMed:9846747]
[WorldCat.org]
[DOI]
(P p)
