Difference between revisions of "Tsf"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rpsB]]'', ''[[pyrH]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rpsB]]'', ''[[pyrH]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16500 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16500 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16500 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16500 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16500 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16500 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:tsf_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:tsf_context.gif]]

Revision as of 10:15, 14 May 2013

  • Description: elongation factor Ts

Gene name tsf
Synonyms
Essential yes PubMed
Product elongation factor Ts
Function translation
Gene expression levels in SubtiExpress: tsf
MW, pI 32 kDa, 4.983
Gene length, protein length 879 bp, 293 aa
Immediate neighbours rpsB, pyrH
Sequences Protein DNA DNA_with_flanks
Genetic context
Tsf context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Tsf expression.png
























Categories containing this gene/protein

translation, essential genes, phosphoproteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU16500

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: EF-Ts family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylation on Ser-149 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References