Difference between revisions of "SigI"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykoY]]'', ''[[rsgI]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykoY]]'', ''[[rsgI]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13450 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13450 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13450 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13450 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13450 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13450 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:sigI_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:sigI_context.gif]]

Revision as of 10:02, 14 May 2013

Gene name sigI
Synonyms ykoZ
Essential no
Product RNA polymerase sigma factor SigI
Function control of a class of heat shock genes
Gene expression levels in SubtiExpress: sigI
Interactions involving this protein in SubtInteract: SigI
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 29 kDa, 8.306
Gene length, protein length 753 bp, 251 aa
Immediate neighbours ykoY, rsgI
Sequences Protein DNA DNA_with_flanks
Genetic context
SigI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SigI expression.png




























Categories containing this gene/protein

transcription, sigma factors and their control, heat shock proteins

This gene is a member of the following regulons

SigI regulon

The SigI regulon: bcrC, gsiB, lytE, mreBH, sigI-rsgI

The gene

Basic information

  • Locus tag: BSU13450

Phenotypes of a mutant

  • temperature-sensitive growth on agar plates PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

overexpression of SigI suppresses mreB mreBH mbl mutants PubMed

Expression and regulation

  • Regulation: induced by heat PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References