Difference between revisions of "MtlR"
(→Reviews) |
|||
Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of mannitol utilization | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of mannitol utilization | ||
|- | |- | ||
− | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU04160 mtlR] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/MtlR MtlR] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/MtlR MtlR] | ||
Line 26: | Line 26: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycsN]]'', ''[[ydaB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycsN]]'', ''[[ydaB]]'' | ||
|- | |- | ||
− | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04160 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04160 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04160 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:mtlR_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:mtlR_context.gif]] |
Revision as of 12:09, 13 May 2013
Gene name | mtlR |
Synonyms | ydaA |
Essential | no |
Product | transcriptional activator, PRD-type |
Function | regulation of mannitol utilization |
Gene expression levels in SubtiExpress: mtlR | |
Interactions involving this protein in SubtInteract: MtlR | |
Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
MW, pI | 78 kDa, 5.313 |
Gene length, protein length | 2082 bp, 694 aa |
Immediate neighbours | ycsN, ydaB |
Sequences | Protein DNA Advanced_DNA |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
utilization of specific carbon sources, transcription factors and their control, phosphoproteins
This gene is a member of the following regulons
The MtlR regulon:
The gene
Basic information
- Locus tag: BSU04160
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: N-terminal DNA-binding domains, two PTS-regulation domains (PRD1 and PRD2), EIIB (Gat)-like domain, EIIA (Mtl)-like domain
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- activity is stimulated by PtsH-dependent phosphorylation in PRD2 (mechnism of carbon catabolite repression) PubMed
- activity is inhibited by MtlF-dependent phosphorylation in the EIIB(Gat)-like domain on Cys-419 (this prevents activity in the absence of mannitol and allows induction in presence of mannitol) PubMed
Database entries
- Structure:
- UniProt: P96574
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: mtlR PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Philippe Joyet, Houda Bouraoui, Francine Moussan Désirée Aké, Meriem Derkaoui, Arthur Constant Zébré, Thanh Nguyen Cao, Magali Ventroux, Sylvie Nessler, Marie-Françoise Noirot-Gros, Josef Deutscher, Eliane Milohanic
Transcription regulators controlled by interaction with enzyme IIB components of the phosphoenolpyruvate: sugar phosphotransferase system.
Biochim Biophys Acta: 2013, 1834(7);1415-24
[PubMed:23318733]
[WorldCat.org]
[DOI]
(P p)
J Stülke, M Arnaud, G Rapoport, I Martin-Verstraete
PRD--a protein domain involved in PTS-dependent induction and carbon catabolite repression of catabolic operons in bacteria.
Mol Microbiol: 1998, 28(5);865-74
[PubMed:9663674]
[WorldCat.org]
[DOI]
(P p)
Original publications
Additional publications: PubMed