Difference between revisions of "YfjR"
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU07990 yfjR] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 4.782 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 4.782 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pdaA]]'', ''[[yfjQ]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pdaA]]'', ''[[yfjQ]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07990 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yfjR_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yfjR_context.gif]] | ||
Revision as of 12:22, 13 May 2013
- Description: similar to 3-hydroxyisobutyrate dehydrogenase
| Gene name | yfjR |
| Synonyms | |
| Essential | no |
| Product | 3-hydroxyisobutyrate dehydrogenase |
| Function | unknown |
| Gene expression levels in SubtiExpress: yfjR | |
| MW, pI | 27 kDa, 4.782 |
| Gene length, protein length | 783 bp, 261 aa |
| Immediate neighbours | pdaA, yfjQ |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
phosphoproteins, poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU07990
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: 3-hydroxyisobutyrate dehydrogenase family (according to Swiss-Prot)
- Paralogous protein(s): YkwC
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylated on ser/ thr/ tyr PubMed
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O34969
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yfjR (according to DBTBS)
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Mitsuo Ogura, Kensuke Tsukahara, Teruo Tanaka
Identification of the sequences recognized by the Bacillus subtilis response regulator YclJ.
Arch Microbiol: 2010, 192(7);569-80
[PubMed:20512483]
[WorldCat.org]
[DOI]
(I p)
Alain Lévine, Françoise Vannier, Cédric Absalon, Lauriane Kuhn, Peter Jackson, Elaine Scrivener, Valérie Labas, Joëlle Vinh, Patrick Courtney, Jérôme Garin, Simone J Séror
Analysis of the dynamic Bacillus subtilis Ser/Thr/Tyr phosphoproteome implicated in a wide variety of cellular processes.
Proteomics: 2006, 6(7);2157-73
[PubMed:16493705]
[WorldCat.org]
[DOI]
(P p)
