Difference between revisions of "CtaO"
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|style="background:#ABCDEF;" align="center"|'''Function''' || heme biosynthesis | |style="background:#ABCDEF;" align="center"|'''Function''' || heme biosynthesis | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU12080 ctaO] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 36 kDa, 10.121 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 36 kDa, 10.121 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjdJ]]'', ''[[cotT]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjdJ]]'', ''[[cotT]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12080 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12080 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12080 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:ctaO_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ctaO_context.gif]] | ||
Revision as of 12:35, 13 May 2013
- Description: heme O synthase (minor enzyme)
| Gene name | ctaO |
| Synonyms | yjdK |
| Essential | no |
| Product | heme O synthase (minor enzyme) |
| Function | heme biosynthesis |
| Gene expression levels in SubtiExpress: ctaO | |
| MW, pI | 36 kDa, 10.121 |
| Gene length, protein length | 987 bp, 329 aa |
| Immediate neighbours | yjdJ, cotT |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
biosynthesis of cofactors, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU12080
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: Protoheme IX farnesyltransferase subfamily (according to Swiss-Prot)
- Paralogous protein(s): CtaB
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O31652
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. Mol Microbiol. 2011 81(6): 1459-1473. PubMed:21815947
M Throne-Holst, L Hederstedt
The Bacillus subtilis ctaB paralogue, yjdK, can complement the heme A synthesis deficiency of a CtaB-deficient mutant.
FEMS Microbiol Lett: 2000, 183(2);247-51
[PubMed:10675592]
[WorldCat.org]
[DOI]
(P p)
