Difference between revisions of "RsmG"

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|style="background:#ABCDEF;" align="center"|'''Function''' || rRNA modification
 
|style="background:#ABCDEF;" align="center"|'''Function''' || rRNA modification
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU41000 rsmG]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU41000 rsmG]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 26 kDa, 6.603   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 26 kDa, 6.603   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[noc]]'', ''[[gidA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[noc]]'', ''[[gidA]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB16137&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU41000 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU41000 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU41000 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:gidB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gidB_context.gif]]

Revision as of 14:21, 13 May 2013

  • Description: 7-methylguanosine methyltransferase specific for the 16S rRNA, glucose-inhibited division protein

Gene name gidB
Synonyms
Essential no
Product 7-methylguanosine methyltransferase specific for the 16S rRNA
Function rRNA modification
Gene expression levels in SubtiExpress: rsmG
MW, pI 26 kDa, 6.603
Gene length, protein length 717 bp, 239 aa
Immediate neighbours noc, gidA
Sequences Protein DNA Advanced_DNA
Genetic context
GidB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RsmG expression.png
























Categories containing this gene/protein

translation

This gene is a member of the following regulons

ComK regulon

The gene

Basic information

  • Locus tag: BSU41000

Phenotypes of a mutant

low-level resistance to streptomycin, increased level of streptomycin-resistant rpsL mutants (200 times higher than in the wild type) PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: methylates the N7 position of nucleotide G535 in 16S rRNA PubMed
  • Protein family: RNA methyltransferase rsmG family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References