Difference between revisions of "YqfU"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU25110 yqfU]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU25110 yqfU]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 32 kDa, 6.261   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 32 kDa, 6.261   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[zur]]'', ''[[yqfT]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[zur]]'', ''[[yqfT]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14441&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU25110 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU25110 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU25110 Advanced_DNA]
 
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Revision as of 13:19, 13 May 2013

  • Description: unknown

Gene name yqfU
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yqfU
MW, pI 32 kDa, 6.261
Gene length, protein length 879 bp, 293 aa
Immediate neighbours zur, yqfT
Sequences Protein DNA Advanced_DNA
Genetic context
YqfU context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqfU expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU25110

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

The gene yqfT is located between nfo and yqfU, but is transcribed in the opposite direction.

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Norma Urtiz-Estrada, José M Salas-Pacheco, Ronald E Yasbin, Mario Pedraza-Reyes
Forespore-specific expression of Bacillus subtilis yqfS, which encodes type IV apurinic/apyrimidinic endonuclease, a component of the base excision repair pathway.
J Bacteriol: 2003, 185(1);340-8
[PubMed:12486072] [WorldCat.org] [DOI] (P p)