Difference between revisions of "LipC"
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| − | + | * '''Description:''' phospholipase implicated in spore germination <br/><br/> | |
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|style="background:#ABCDEF;" align="center"|'''Function''' || spore germination | |style="background:#ABCDEF;" align="center"|'''Function''' || spore germination | ||
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay]''' | ||
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|colspan="2" | '''Genetic context''' <br/> [[Image:ycsK_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ycsK_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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__TOC__ | __TOC__ | ||
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** ''lipC'' (according to [http://dbtbs.hgc.jp/COG/prom/ycsFGI-kipIAR-ycsK.html DBTBS]) | ** ''lipC'' (according to [http://dbtbs.hgc.jp/COG/prom/ycsFGI-kipIAR-ycsK.html DBTBS]) | ||
| − | * | + | * '''[[Sigma factor]]:''' |
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** ''lipC'': [[SigK]] {{PubMed|15699190,17220230}} | ** ''lipC'': [[SigK]] {{PubMed|15699190,17220230}} | ||
Revision as of 11:07, 7 August 2012
- Description: phospholipase implicated in spore germination
| Gene name | lipC |
| Synonyms | ycsK |
| Essential | no |
| Product | spore coat phospholipase B |
| Function | spore germination |
| Function and regulation of this protein in SubtiPathways: Phosphorelay | |
| MW, pI | 23 kDa, 5.839 |
| Gene length, protein length | 639 bp, 213 aa |
| Immediate neighbours | kipR, yczI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
utilization of lipids, sporulation proteins, germination
This gene is a member of the following regulons
KipR regulon, SigK regulon, TnrA regulon
The gene
Basic information
- Locus tag: BSU04110
Phenotypes of a mutant
defective in L-alanine-stimulated germination PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: cleaves the fatty acids at the sn-1 and sn-2 positions of phospholipids PubMed
- Protein family: 'GDSL' lipolytic enzyme family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- spore coat PubMed
Database entries
- Structure:
- UniProt: P42969
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
