Difference between revisions of "SpeB"

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|style="background:#ABCDEF;" align="center"|'''Function''' || spermidine, polyamine biosynthesis
 
|style="background:#ABCDEF;" align="center"|'''Function''' || spermidine, polyamine biosynthesis
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU37490 speB]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/cys_meth_and_sulfate_assimilation.html Cys, Met & Sulfate assimilation]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/cys_meth_and_sulfate_assimilation.html Cys, Met & Sulfate assimilation]'''

Revision as of 17:03, 7 August 2012

  • Description: agmatinase

Gene name speB
Synonyms ywhG
Essential no
Product agmatinase
Function spermidine, polyamine biosynthesis
Gene expression levels in SubtiExpress: speB
Metabolic function and regulation of this protein in SubtiPathways:
Cys, Met & Sulfate assimilation
MW, pI 32 kDa, 4.768
Gene length, protein length 870 bp, 290 aa
Immediate neighbours ywhH, speE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SpeB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpeB expression.png




























Categories containing this gene/protein

miscellaneous metabolic pathways

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU37490

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Agmatine + H2O = putrescine + urea (according to Swiss-Prot)
  • Protein family: Agmatinase subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References