Difference between revisions of "CmpA"
(Created page with "* '''Description:''' spore coat protein <br/><br/> {| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Gene name''' |''cmpA'' |- |styl...") |
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[SigE regulon]]}}, | {{SubtiWiki regulon|[[SigE regulon]]}}, | ||
− | {{SubtiWiki regulon|[[ | + | {{SubtiWiki regulon|[[SpoIIID regulon]]}} |
=The gene= | =The gene= | ||
Line 42: | Line 42: | ||
=== Basic information === | === Basic information === | ||
− | * '''Locus tag:''' | + | * '''Locus tag:''' not available |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
Line 48: | Line 48: | ||
=== Database entries === | === Database entries === | ||
− | * '''DBTBS entry:''' | + | * '''DBTBS entry:''' no entry |
− | * '''SubtiList entry:''' | + | * '''SubtiList entry:''' no entry |
=== Additional information=== | === Additional information=== | ||
Line 59: | Line 59: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
− | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' |
− | * '''Protein family:''' | + | * '''Protein family:''' |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
Line 78: | Line 78: | ||
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
− | |||
− | |||
− | |||
* '''[[Localization]]:''' | * '''[[Localization]]:''' | ||
− | ** | + | ** surface of the developing spore {{PubMed|22463703}} |
+ | |||
=== Database entries === | === Database entries === | ||
* '''Structure:''' | * '''Structure:''' | ||
− | * '''UniProt:''' | + | * '''UniProt:''' |
− | * '''KEGG entry:''' | + | * '''KEGG entry:''' |
* '''E.C. number:''' | * '''E.C. number:''' | ||
Line 98: | Line 96: | ||
=Expression and regulation= | =Expression and regulation= | ||
− | * '''Operon:''' ''[[ | + | * '''Operon:''' ''[[cmpA]]'' {{PubMed|22463703}} |
− | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed| | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|22463703}} |
* '''Regulation:''' | * '''Regulation:''' | ||
− | + | ** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|22463703}} | |
− | ** expressed during sporulation in the mother cell ([[SigE | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
+ | ** [[SpoIIID]]: transcription activation {{PubMed|22463703}} | ||
* '''Additional information:''' | * '''Additional information:''' |
Revision as of 16:39, 11 April 2012
- Description: spore coat protein
Gene name | cmpA |
Synonyms | |
Essential | no |
Product | cortex morphogenetic protein A |
Function | |
MW, pI | |
Gene length, protein length | 111 bp, 37 aa |
Immediate neighbours | ydcI, ydcK |
Get the DNA and protein sequences (Ebmeier et al., 2012) | |
Genetic context |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: not available
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: no entry
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- surface of the developing spore PubMed
Database entries
- Structure:
- UniProt:
- KEGG entry:
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Arthur Aronson, Purdue University, West Lafayette, USA homepage
Adriano Henriques, Lisbon, Portugal homepage
Your additional remarks
References
Additional publications: PubMed
Rachele Isticato, Assunta Pelosi, Maurilio De Felice, Ezio Ricca
CotE binds to CotC and CotU and mediates their interaction during spore coat formation in Bacillus subtilis.
J Bacteriol: 2010, 192(4);949-54
[PubMed:20023017]
[WorldCat.org]
[DOI]
(I p)
Daniela Krajcíková, Magda Lukácová, Denisa Müllerová, Simon M Cutting, Imrich Barák
Searching for protein-protein interactions within the Bacillus subtilis spore coat.
J Bacteriol: 2009, 191(10);3212-9
[PubMed:19304857]
[WorldCat.org]
[DOI]
(I p)
Rachele Isticato, Assunta Pelosi, Rita Zilhão, Loredana Baccigalupi, Adriano O Henriques, Maurilio De Felice, Ezio Ricca
CotC-CotU heterodimerization during assembly of the Bacillus subtilis spore coat.
J Bacteriol: 2008, 190(4);1267-75
[PubMed:18065538]
[WorldCat.org]
[DOI]
(I p)
Caitlin C Ferguson, Amy H Camp, Richard Losick
gerT, a newly discovered germination gene under the control of the sporulation transcription factor sigmaK in Bacillus subtilis.
J Bacteriol: 2007, 189(21);7681-9
[PubMed:17720779]
[WorldCat.org]
[DOI]
(P p)
Teresa Costa, Mónica Serrano, Leif Steil, Uwe Völker, Charles P Moran, Adriano O Henriques
The timing of cotE expression affects Bacillus subtilis spore coat morphology but not lysozyme resistance.
J Bacteriol: 2007, 189(6);2401-10
[PubMed:17172339]
[WorldCat.org]
[DOI]
(P p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
Katerina Ragkousi, Patrick Eichenberger, Christiaan van Ooij, Peter Setlow
Identification of a new gene essential for germination of Bacillus subtilis spores with Ca2+-dipicolinate.
J Bacteriol: 2003, 185(7);2315-29
[PubMed:12644503]
[WorldCat.org]
[DOI]
(P p)
Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147]
[WorldCat.org]
[DOI]
(P p)
S Little, A Driks
Functional analysis of the Bacillus subtilis morphogenetic spore coat protein CotE.
Mol Microbiol: 2001, 42(4);1107-20
[PubMed:11737650]
[WorldCat.org]
[DOI]
(P p)
T Bauer, S Little, A G Stöver, A Driks
Functional regions of the Bacillus subtilis spore coat morphogenetic protein CotE.
J Bacteriol: 1999, 181(22);7043-51
[PubMed:10559171]
[WorldCat.org]
[DOI]
(P p)
F Ginetti, M Perego, A M Albertini, A Galizzi
Bacillus subtilis mutS mutL operon: identification, nucleotide sequence and mutagenesis.
Microbiology (Reading): 1996, 142 ( Pt 8);2021-9
[PubMed:8760914]
[WorldCat.org]
[DOI]
(P p)
K Pogliano, E Harry, R Losick
Visualization of the subcellular location of sporulation proteins in Bacillus subtilis using immunofluorescence microscopy.
Mol Microbiol: 1995, 18(3);459-70
[PubMed:8748030]
[WorldCat.org]
[DOI]
(P p)
C D Webb, A Decatur, A Teleman, R Losick
Use of green fluorescent protein for visualization of cell-specific gene expression and subcellular protein localization during sporulation in Bacillus subtilis.
J Bacteriol: 1995, 177(20);5906-11
[PubMed:7592342]
[WorldCat.org]
[DOI]
(P p)
A Driks, S Roels, B Beall, C P Moran, R Losick
Subcellular localization of proteins involved in the assembly of the spore coat of Bacillus subtilis.
Genes Dev: 1994, 8(2);234-44
[PubMed:8299942]
[WorldCat.org]
[DOI]
(P p)
L B Zheng, R Losick
Cascade regulation of spore coat gene expression in Bacillus subtilis.
J Mol Biol: 1990, 212(4);645-60
[PubMed:1691789]
[WorldCat.org]
[DOI]
(P p)
L B Zheng, W P Donovan, P C Fitz-James, R Losick
Gene encoding a morphogenic protein required in the assembly of the outer coat of the Bacillus subtilis endospore.
Genes Dev: 1988, 2(8);1047-54
[PubMed:3139490]
[WorldCat.org]
[DOI]
(P p)