Difference between revisions of "SpoIIAA"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[dacF]]-[[spoIIAA]]-[[spoIIAB]]-[[sigF]]'' | + | * '''Operon:''' |
| − | ''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]'' | + | ** ''[[dacF]]-[[spoIIAA]]-[[spoIIAB]]-[[sigF]]'' |
| + | ** ''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]'' | ||
| − | * '''[[Sigma factor]]:''' ''[[dacF]]'': [[SigF]], [[SigG]] | + | * '''[[Sigma factor]]:''' |
| − | ''[[spoIIAA]]'': [[SigH]] | + | ** ''[[dacF]]'': [[SigF]], [[SigG]] |
| + | ** ''[[spoIIAA]]'': [[SigH]] | ||
* '''Regulation:''' repressed by glucose (5.2-fold) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed], ''[[dacF]]'': expressed during sporulation, ''[[spoIIAA]]'': expressed early during sporulation | * '''Regulation:''' repressed by glucose (5.2-fold) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed], ''[[dacF]]'': expressed during sporulation, ''[[spoIIAA]]'': expressed early during sporulation | ||
| Line 127: | Line 129: | ||
=References= | =References= | ||
| − | <pubmed>1391042,8358793,8955289,15023063,15351644,9077448,10323866,8820658,8622920,16824103,7570023,10476035,8932322,8764398,8764397,12676949,9826498,9826499,14744853,9642177,11684022,8846916,11298272,1948031,3114419,11846550,15201047,2123551,8168129,,1556084,15687200,12850135 16493705 17218307, </pubmed> | + | <pubmed>1391042,8358793,8955289,15023063,15351644,9077448,10323866,8820658,8622920,16824103,7570023,10476035,8932322,8764398,8764397,12676949,9826498,9826499,14744853,9642177,11684022,8846916,11298272,1948031,3114419,11846550,15201047,2123551,8168129,,1556084,15687200,12850135 16493705 17218307, 20298743 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 08:30, 20 March 2010
- Description: anti-anti-SigF
| Gene name | spoIIAA |
| Synonyms | |
| Essential | no |
| Product | anti-anti-SigF |
| Function | control of SigF activity |
| Metabolic function and regulation of this protein in SubtiPathways: Stress | |
| MW, pI | 12 kDa, 5.855 |
| Gene length, protein length | 351 bp, 117 aa |
| Immediate neighbours | spoIIAB, dacF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU23470
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: anti-sigma-factor antagonist family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
Database entries
- UniProt: P10727
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation: repressed by glucose (5.2-fold) PubMed, dacF: expressed during sporulation, spoIIAA: expressed early during sporulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
- Tony Wilkinson, York University, U.K. homepage
- Charles Moran, Emory University, NC, USA homepage
Your additional remarks
References
