Difference between revisions of "SpoVD"
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[spoVD]]'' {{PubMed|8436954}} |
| − | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}} | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,15758244}} |
| − | * '''Regulation:''' expressed during sporulation in the mother cell [ | + | * '''Regulation:''' |
| + | ** expressed during sporulation in the mother cell ([[SigE]]) {{PubMed|15699190,15758244}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | |||
| + | ** [[SpoIIID]]: transcription repression {{PubMed|9006059}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 118: | Line 121: | ||
=References= | =References= | ||
| − | <pubmed>9006059,8289242,, </pubmed> | + | <pubmed>9006059,8289242,15699190,15758244, 8436954 9006059 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 16:03, 10 October 2009
- Description: mother-cell specific penicillin-binding protein (spore cortex)
| Gene name | spoVD |
| Synonyms | |
| Essential | no |
| Product | penicillin-binding protein (spore cortex) |
| Function | spore morphogenesis |
| MW, pI | 71 kDa, 8.85 |
| Gene length, protein length | 1935 bp, 645 aa |
| Immediate neighbours | pbpB, murE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU15170
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: PASTA domain (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: Q03524
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Dirk-Jan Scheffers
Dynamic localization of penicillin-binding proteins during spore development in Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 3);999-1012
[PubMed:15758244]
[WorldCat.org]
[DOI]
(P p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
B Zhang, R A Daniel, J Errington, L Kroos
Bacillus subtilis SpoIIID protein binds to two sites in the spoVD promoter and represses transcription by sigmaE RNA polymerase.
J Bacteriol: 1997, 179(3);972-5
[PubMed:9006059]
[WorldCat.org]
[DOI]
(P p)
R A Daniel, S Drake, C E Buchanan, R Scholle, J Errington
The Bacillus subtilis spoVD gene encodes a mother-cell-specific penicillin-binding protein required for spore morphogenesis.
J Mol Biol: 1994, 235(1);209-20
[PubMed:8289242]
[WorldCat.org]
[DOI]
(P p)
R A Daniel, J Errington
DNA sequence of the murE-murD region of Bacillus subtilis 168.
J Gen Microbiol: 1993, 139(2);361-70
[PubMed:8436954]
[WorldCat.org]
[DOI]
(P p)
