Difference between revisions of "AraP"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[araQ]]'', ''[[araN]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[araQ]]'', ''[[araN]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/araP_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14834&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/araP_protein.txt Protein sequence]'''
 
 
|-
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:araP_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:araP_context.gif]]

Revision as of 01:45, 17 April 2009

  • Description: L-arabinose transport (integral membrane protein)

Gene name araP
Synonyms yseD
Essential no
Product L-arabinose transport (integral membrane protein))
Function uptake of arabinose
MW, pI 34 kDa, 9.69
Gene length, protein length 939 bp, 313 aa
Immediate neighbours araQ, araN
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
AraP context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: repressed by glucose (CcpA)
  • Regulatory mechanism: CcpA: transcription repression
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Inácio JM, Costa C, de Sá-Nogueira I. (2003) Distinct molecular mechanisms involved in carbon catabolite repression of the arabinose regulon in Bacillus subtilis. Microbiology. Sep;149(Pt 9): 2345-55. PubMed
  2. Sa-Nogueira I.M.G., Nogueira T.V., Soares S., de Lencastre H. (1997) The Bacillus subtilis L-arabinose (ara) operon: nucleotide sequence, genetic organization and expression. Microbiology. Mar;143(Pt 3): 957-69. PubMed
  3. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed