Difference between revisions of "SigF"
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− | * '''Description:''' RNA polymerase forespore-specific (early) sigma factor SigF <br/><br/> | + | * '''Description:''' RNA polymerase forespore-specific (early) [[sigma factor]] SigF <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
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− | |style="background:#ABCDEF;" align="center"| '''Product''' || RNA polymerase forespore-specific (early) sigma factor SigF | + | |style="background:#ABCDEF;" align="center"| '''Product''' || RNA polymerase forespore-specific (early) [[sigma factor]] SigF |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || transcription of sporulation genes (late mother cell) | |style="background:#ABCDEF;" align="center"|'''Function''' || transcription of sporulation genes (late mother cell) | ||
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''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]'' | ''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]'' | ||
− | * '''Sigma factor:''' ''[[dacF]]'': [[SigF]], [[SigG]] | + | * '''[[Sigma factor]]:''' ''[[dacF]]'': [[SigF]], [[SigG]] |
''[[spoIIA]]'': [[SigH]] | ''[[spoIIA]]'': [[SigH]] | ||
Revision as of 17:07, 7 April 2009
- Description: RNA polymerase forespore-specific (early) sigma factor SigF
Gene name | sigF |
Synonyms | spoIIAC |
Essential | no |
Product | RNA polymerase forespore-specific (early) sigma factor SigF |
Function | transcription of sporulation genes (late mother cell) |
MW, pI | 29 kDa, 5.078 |
Gene length, protein length | 765 bp, 255 aa |
Immediate neighbours | spoVAA, spoIIAB |
Gene sequence (+200bp) | Protein sequence |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Genes controlled by SigF
dacF-spoIIAA-spoIIAB-sigF, sigG, pbpF, yphA-seaA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor: dacF: SigF, SigG
- Regulation: repressed by casamino acids PubMed , dacF: expressed during sporulation, spoIIAA: expressed early during sporulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody: