Difference between revisions of "NusA substrates"
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| − | [[NusA]] is a | + | [[NusA]] is a [[transcription]] termination factor that stimulates termination at weak intrinsic terminators. |
==[[NusA]] substrates in ''B. subtilis''== | ==[[NusA]] substrates in ''B. subtilis''== | ||
| + | === The strongest [[NusA]]-dependent terminators=== | ||
| + | * ''[[metS]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[nrdR]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[xre]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[ydjM]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[yfzA]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[ypmT]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[yqxC]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[ytzE]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[yusV]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[yuxK]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | |||
| + | === Terminators that are stimulated by [[NusA]]=== | ||
* ''[[nusA]]'', stimulation of termination [http://www.nature.com/articles/nmicrobiol20157 reference] | * ''[[nusA]]'', stimulation of termination [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[papB]]'', stimulation of termination [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | |||
| + | === Terminators that are inhibited by [[NusA]]=== | ||
| + | * ''[[ilvD]]'', the terminator is inhibited by [[NusA]] [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[yetH]]'', the terminator is inhibited by [[NusA]] [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[yvbJ]]'', the terminator is inhibited by [[NusA]] [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
| + | * ''[[thrS]]'', the attenuator ([[T-box]]) is inhibited by [[NusA]] [http://www.nature.com/articles/nmicrobiol20157 reference] | ||
===Reference=== | ===Reference=== | ||
[http://www.nature.com/articles/nmicrobiol20157 Mondal et al., 2016, Nature Microbiology] | [http://www.nature.com/articles/nmicrobiol20157 Mondal et al., 2016, Nature Microbiology] | ||
Latest revision as of 13:36, 16 May 2016
NusA is a transcription termination factor that stimulates termination at weak intrinsic terminators.
Contents
NusA substrates in B. subtilis
The strongest NusA-dependent terminators
- metS, terminator is NusA-dependent reference
- nrdR, terminator is NusA-dependent reference
- xre, terminator is NusA-dependent reference
- ydjM, terminator is NusA-dependent reference
- yfzA, terminator is NusA-dependent reference
- ypmT, terminator is NusA-dependent reference
- yqxC, terminator is NusA-dependent reference
- ytzE, terminator is NusA-dependent reference
- yusV, terminator is NusA-dependent reference
- yuxK, terminator is NusA-dependent reference
Terminators that are stimulated by NusA
Terminators that are inhibited by NusA
- ilvD, the terminator is inhibited by NusA reference
- yetH, the terminator is inhibited by NusA reference
- yvbJ, the terminator is inhibited by NusA reference
- thrS, the attenuator (T-box) is inhibited by NusA reference
