Difference between revisions of "SpeE"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU37500&redirect=T BSU37500]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/speE-speB.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/speE-speB.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU37500&redirect=T BSU37500]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1IY9 1IY9]
 
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1IY9 1IY9]

Revision as of 15:05, 2 April 2014

  • Description: spermidine synthase

Gene name speE
Synonyms ywhF
Essential no
Product spermidine synthase
Function spermidine, polyamine biosynthesis
Gene expression levels in SubtiExpress: speE
Metabolic function and regulation of this protein in SubtiPathways:
speE
MW, pI 31 kDa, 5.068
Gene length, protein length 828 bp, 276 aa
Immediate neighbours speB, pbpG
Sequences Protein DNA DNA_with_flanks
Genetic context
SpeE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpeE expression.png




























Categories containing this gene/protein

miscellaneous metabolic pathways

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU37500

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: S-adenosylmethioninamine + putrescine = 5'-S-methyl-5'-thioadenosine + spermidine (according to Swiss-Prot)
  • Protein family: spermidine/spermine synthase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

A Sekowska, P Bertin, A Danchin
Characterization of polyamine synthesis pathway in Bacillus subtilis 168.
Mol Microbiol: 1998, 29(3);851-8
[PubMed:9723923] [WorldCat.org] [DOI] (P p)