Difference between revisions of "KinA"

From SubtiWiki
Jump to: navigation, search
Line 61: Line 61:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU13990&redirect=T BSU13990]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/kinA.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/kinA.html]
Line 111: Line 112:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU13990&redirect=T BSU13990]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2VLG 2VLG] (PAS domain)
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2VLG 2VLG] (PAS domain)

Revision as of 13:34, 2 April 2014

Gene name kinA
Synonyms spoIIF, spoIIJ, gsiC, scoB, scoD
Essential no
Product two-component sensor kinase
Function initiation of sporulation
Gene expression levels in SubtiExpress: kinA
Interactions involving this protein in SubtInteract: KinA
Function and regulation of this protein in SubtiPathways:
kinA
MW, pI 68 kDa, 5.491
Gene length, protein length 1818 bp, 606 aa
Immediate neighbours pbpH, patA
Sequences Protein DNA DNA_with_flanks
Genetic context
KinA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
KinA expression.png















Categories containing this gene/protein

protein modification, transcription factors and their control, phosphorelay, phosphoproteins

This gene is a member of the following regulons

SigH regulon, Spo0A regulon, stringent response

The gene

Basic information

  • Locus tag: BSU13990

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • autophosphorylation, phosphorylation of Spo0F
    • mainly active in the older, inner regions of a colony (with KinB) PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
    • three tandem PAS domains in the N-terminal region of KinA, the second PAS domain is the major N-terminal determinant of KinA dimerization PubMed
    • the first PAS domain is required for NAD(+) binding PubMed
    • C-terminal histidine phosphotransferase domain
  • Modification: autophosphorylation on a His residue
  • Cofactor(s):
  • Effectors of protein activity:
    • interaction with KipI or Sda inhibits autophosphorylation of KinA PubMed
    • autophosphorylation is inhibited by SivA and BslA PubMed
    • activated by interaction with NAD(+) that indicated poor respiratory activity of the cell PubMed

Database entries

  • Structure: 2VLG (PAS domain)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Liza Gross
Built-in timer delays differentiation.
PLoS Biol: 2012, 10(1);e1001254
[PubMed:22303284] [WorldCat.org] [DOI] (I p)

Original Publications